Transcript: lnc-PRSS40B-1:3

Basic information

LNCipedia transcript ID: lnc-PRSS40B-1:3 
LNCipedia gene ID: lnc-PRSS40B-1
Location (hg38): chr2:130536570-130549915
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2229 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT074357; NR_033930
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.8292 non-coding 
CPAT coding probability 7.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRSS40B-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC013269.5.1-1:1
4.0 lnc-AC013269.5.1-1:1
4.1 lnc-AC013269.5.1-1:1
5.0 lnc-AC013269.5.1-1:1
5.1 lnc-PRSS40B-1:1
5.2 lnc-PRSS40B-1:3