Transcript: lnc-PRSS51-2:2

Basic information

LNCipedia transcript ID: lnc-PRSS51-2:2 
LNCipedia gene ID: lnc-PRSS51-2
Location (hg38): chr8:10482924-10518015
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 577 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000521149.1; RP11-981G7.4-001; OTTHUMT00000375670.1; NONHSAT125002
Alternative gene names: ENSG00000253649.1; RP11-981G7.4; OTTHUMG00000163805.1; PRSS51


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 69.0791 coding 
CPAT coding probability 7.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PRSS51-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP1L1-2:2
4.0 lnc-RP1L1-2:2
4.1 lnc-RP1L1-2:2
5.0 lnc-RP1L1-2:2
5.1 lnc-PINX1-9:2
5.2 lnc-PRSS51-2:2