Transcript: lnc-PRSS51-4:5

Basic information

LNCipedia transcript ID: lnc-PRSS51-4:5 
LNCipedia gene ID: lnc-PRSS51-4
Location (hg38): chr8:10037851-10051963
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 685 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014932; NONHSAT124978
Alternative gene names: XLOC_007003; linc-PPP1R3B-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.7354 non-coding 
CPAT coding probability 1.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRSS51-4:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP1L1-3:1
3.1 lnc-RP1L1-4:2
4.0 lnc-RP1L1-4:2
4.1 lnc-RP1L1-4:2
5.0 lnc-RP1L1-4:2
5.1 lnc-PINX1-26:5
5.2 lnc-PRSS51-4:5