Transcript: lnc-PRSS55-1:8

Basic information

LNCipedia transcript ID: lnc-PRSS55-1:8 
LNCipedia gene ID: lnc-PRSS55-1
Ensembl Gene ID: ENSG00000272505
Ensembl Transcript ID: ENST00000606115
Location (hg38): chr8:10486807-10489666
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2860 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000606115.1
Alternative gene names: ENSG00000272505.1; RP11-981G7.6; AC104964.3; AC104964.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.6554 non-coding 
CPAT coding probability 1.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PRSS55-1:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRSS55-1:8
4.0 lnc-PRSS55-1:8
4.1 lnc-PRSS55-1:8
5.0 lnc-PRSS55-1:8
5.1 lnc-DEFB106A-51:8
5.2 lnc-PRSS55-1:8