Transcript: lnc-PSD-1:3

Basic information

LNCipedia transcript ID: lnc-PSD-1:3 
LNCipedia gene ID: lnc-PSD-1
Location (hg38): chr10:102416654-102419718
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 590 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT016106
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.0722 non-coding 
CPAT coding probability 52.88% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PSD-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CUEDC2-1:3
4.0 lnc-PSD-1:3
4.1 lnc-PSD-1:3
5.0 lnc-PSD-1:3
5.1 lnc-CPN1-77:3
5.2 lnc-PSD-1:3