Transcript: lnc-PSD3-1:5

Basic information

LNCipedia transcript ID: lnc-PSD3-1:5 
LNCipedia gene ID: lnc-PSD3-1
Location (hg38): chr8:19183676-19245522
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1011 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT125362; NR_038919
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -53.4382 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PSD3-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PSD3-1:5
4.0 lnc-PSD3-1:5
4.1 lnc-PSD3-1:5
5.0 lnc-PSD3-1:5
5.1 lnc-EGR3-36:3
5.2 lnc-PSD3-1:5