Transcript: lnc-PSD4-4:1

Basic information

LNCipedia transcript ID: lnc-PSD4-4:1 
LNCipedia gene ID: lnc-PSD4-4
Location (hg38): chr2:113224282-113231944
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 948 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_1928_chr2:113981858-113989521_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.9313 non-coding 
CPAT coding probability 0.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PSD4-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PSD4-4:1
4.0 lnc-PSD4-4:1
4.1 lnc-PSD4-4:1
5.0 lnc-PSD4-4:1
5.1 lnc-SULT1C4-88:1
5.2 lnc-PSD4-4:1