Transcript: lnc-PSMA1-4:1

Basic information

LNCipedia transcript ID: lnc-PSMA1-4:1 
LNCipedia gene ID: lnc-PSMA1-4
Location (hg38): chr11:14474010-14475875
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 697 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT018126
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 444.0606 coding 
CPAT coding probability 7.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PSMA1-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PSMA1-2:1
4.0 lnc-RP11-140L24.4.1-3:1
4.1 lnc-RP11-140L24.4.1-3:1
5.0 lnc-RP11-140L24.4.1-3:1
5.1 lnc-SOX6-16:1
5.2 lnc-PSMA1-4:1