Transcript: lnc-PSMB1-11:2

Basic information

LNCipedia transcript ID: lnc-PSMB1-11:2 
LNCipedia gene ID: lnc-PSMB1-11
Location (hg38): chr6:170294361-170295905
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1545 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271234.1|ENCT00000393914.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -36.7865 non-coding 
CPAT coding probability 19.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PSMB1-11:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DLL1-11:2
5.0 lnc-DLL1-11:2
5.1 lnc-PRKN-101:2
5.2 lnc-PSMB1-11:2