Transcript: lnc-PSMB9-6:1

Basic information

LNCipedia transcript ID: lnc-PSMB9-6:1 
LNCipedia gene ID: lnc-PSMB9-6
Location (hg38): chr6:32894723-32903758
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3143 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000499196
Alternative gene names: ENSG00000247909; AL669918.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.6819 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PSMB9-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PSMB9-1:1
3.1 lnc-PSMB9-6:1
4.0 lnc-PSMB9-6:1
4.1 lnc-PSMB9-6:1
5.0 lnc-PSMB9-6:1
5.1 lnc-TNF-76:9
5.2 lnc-PSMB9-6:1