Transcript: lnc-PSMD7-7:1

Basic information

LNCipedia transcript ID: lnc-PSMD7-7:1 
LNCipedia gene ID: lnc-PSMD7-7
Location (hg38): chr16:73764165-73768602
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 791 bp
Exons: 4
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT143643; FPKM1_group_11895_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -135.582 non-coding 
CPAT coding probability 5.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PSMD7-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-44L9.1.1-7:3
4.0 lnc-RP11-44L9.1.1-7:3
4.1 lnc-RP11-44L9.1.1-7:3
5.0 lnc-RP11-44L9.1.1-7:3
5.1 lnc-MARVELD3-45:1
5.2 lnc-PSMD7-7:1