Transcript: lnc-PSMD7-7:4

Basic information

LNCipedia transcript ID: lnc-PSMD7-7:4 
LNCipedia gene ID: lnc-PSMD7-7
Location (hg38): chr16:73764656-73796428
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 679 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT143646
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -79.3868 non-coding 
CPAT coding probability 2.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PSMD7-7:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-44L9.1.1-7:4
4.0 lnc-RP11-44L9.1.1-7:4
4.1 lnc-RP11-44L9.1.1-7:4
5.0 lnc-RP11-44L9.1.1-7:4
5.1 lnc-MARVELD3-45:4
5.2 lnc-PSMD7-7:4