Transcript: lnc-PSMD7-7:7

Basic information

LNCipedia transcript ID: lnc-PSMD7-7:7 
LNCipedia gene ID: lnc-PSMD7-7
Ensembl Gene ID: ENSG00000283457
Ensembl Transcript ID: ENST00000637695
Location (hg38): chr16:73794079-73809733
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 952 bp
Exons: 4
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000637695.1
Alternative gene names: ENSG00000283457.1; RP11-53L24.2; AC087565.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -115.7844 non-coding 
CPAT coding probability 2.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PSMD7-7:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-44L9.1.1-7:7
5.0 lnc-RP11-44L9.1.1-7:7
5.1 lnc-MARVELD3-45:7
5.2 lnc-PSMD7-7:7