Transcript: lnc-PTBP1-2:2

Basic information

LNCipedia transcript ID: lnc-PTBP1-2:2 
LNCipedia gene ID: lnc-PTBP1-2
Location (hg38): chr19:786650-787037
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 388 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT060173; ENST00000591918.2
Alternative gene names: ENSG00000266927.2; AC006273.7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.0317 non-coding 
CPAT coding probability 0.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTBP1-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTBP1-2:2
4.0 lnc-PTBP1-2:2
4.1 lnc-PTBP1-2:2
5.0 lnc-PTBP1-2:2
5.1 lnc-RPL36-169:2
5.2 lnc-PTBP1-2:2