Transcript: lnc-PTBP3-8:2

Basic information

LNCipedia transcript ID: lnc-PTBP3-8:2 
LNCipedia gene ID: lnc-PTBP3-8
Location (hg38): chr9:112469723-112486676
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 402 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT134014
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 6.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTBP3-8:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf147-1:2
4.0 lnc-C9orf147-1:2
4.1 lnc-C9orf147-1:2
5.0 lnc-C9orf147-1:2
5.1 lnc-SLC46A2-14:2
5.2 lnc-PTBP3-8:2