Transcript: lnc-PTCD2-9:1

Basic information

LNCipedia transcript ID: lnc-PTCD2-9:1 
LNCipedia gene ID: lnc-PTCD2-9
Location (hg38): chr5:72518196-72519507
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 526 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000076244.1|MICT00000284060.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -517.9242 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTCD2-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PTCD2-9:1
5.0 lnc-PTCD2-9:1
5.1 lnc-MAP1B-9:1
5.2 lnc-PTCD2-9:1