Transcript: lnc-PTGER4-7:1

Basic information

LNCipedia transcript ID: lnc-PTGER4-7:1 
LNCipedia gene ID: lnc-PTGER4-7
Ensembl Gene ID: ENSG00000283286
Ensembl Transcript ID: ENST00000637776
Location (hg38): chr5:40415137-40431491
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1622 bp
Exons: 2
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000637776.1
Alternative gene names: ENSG00000283286.1; RP11-386E5.1; AC093277.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -113.2932 non-coding 
CPAT coding probability 6.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTGER4-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PTGER4-7:1
5.0 lnc-PTGER4-7:1
5.1 lnc-CARD6-9:1
5.2 lnc-PTGER4-7:1