Transcript: lnc-PTGIR-4:2

Basic information

LNCipedia transcript ID: lnc-PTGIR-4:2 
LNCipedia gene ID: lnc-PTGIR-4
Ensembl Gene ID: ENSG00000268423
Ensembl Transcript ID: ENST00000593888
Location (hg38): chr19:46547056-46600861
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 495 bp
Exons: 5
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000593888.4
Alternative gene names: ENSG00000268423.4; AC011551.3; AC093503.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 14.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTGIR-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PTGIR-4:2
4.1 lnc-PTGIR-4:2
5.0 lnc-PTGIR-4:2
5.1 lnc-TMEM160-26:2
5.2 lnc-PTGIR-4:2