Transcript: lnc-PTHLH-1:2

Basic information

LNCipedia transcript ID: lnc-PTHLH-1:2 
LNCipedia gene ID: lnc-PTHLH-1
Ensembl Gene ID: ENSG00000247934
Ensembl Transcript ID: ENST00000617468
Location (hg38): chr12:28188330-28190738
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2409 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT027469; ENST00000617468.1
Alternative gene names: ENSG00000247934.4; RP11-967K21.1; AC022364.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -111.5079 non-coding 
CPAT coding probability 1.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTHLH-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTHLH-1:2
4.0 lnc-PTHLH-1:2
4.1 lnc-PTHLH-1:2
5.0 lnc-PTHLH-1:2
5.1 lnc-WBP11-113:3
5.2 lnc-PTHLH-1:2