Transcript: lnc-PTHLH-1:6

Basic information

LNCipedia transcript ID: lnc-PTHLH-1:6 
LNCipedia gene ID: lnc-PTHLH-1
Location (hg38): chr12:28175107-28190384
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 15042 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000247934.3|ENCT00000100212.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.5818 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTHLH-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PTHLH-1:6
5.0 lnc-PTHLH-1:6
5.1 lnc-WBP11-113:7
5.2 lnc-PTHLH-1:6