Transcript: lnc-PTP4A2-13:1

Basic information

LNCipedia transcript ID: lnc-PTP4A2-13:1 
LNCipedia gene ID: lnc-PTP4A2-13
Ensembl Gene ID: ENSG00000284702
Ensembl Transcript ID: ENST00000641788
Location (hg38): chr1:31972189-31987034
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1873 bp
Exons: 2
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000641788.1
Alternative gene names: ENSG00000284702.1; AL136115.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 21.2303 non-coding 
CPAT coding probability 6.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTP4A2-13:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-COL16A1-13:1
5.1 lnc-COL16A1-13:1
5.2 lnc-PTP4A2-13:1