Transcript: lnc-PTPN2-6:3

Basic information

LNCipedia transcript ID: lnc-PTPN2-6:3 
LNCipedia gene ID: lnc-PTPN2-6
Location (hg38): chr18:12990532-12991145
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 209 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000266969.1|FTMT26900018093.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 4.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTPN2-6:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PTPN2-6:3
5.0 lnc-PTPN2-6:3
5.1 lnc-SMAD2-251:3
5.2 lnc-PTPN2-6:3