Transcript: lnc-PTPRR-1:2

Basic information

LNCipedia transcript ID: lnc-PTPRR-1:2 
LNCipedia gene ID: lnc-PTPRR-1
Location (hg38): chr12:70539414-70540059
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 552 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT029423
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -189.4846 non-coding 
CPAT coding probability 2.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTPRR-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTPRR-1:2
4.0 lnc-PTPRR-1:2
4.1 lnc-PTPRR-1:2
5.0 lnc-PTPRR-1:2
5.1 lnc-LRRC10-13:2
5.2 lnc-PTPRR-1:2