Transcript: lnc-PTPRR-3:3

Basic information

LNCipedia transcript ID: lnc-PTPRR-3:3 
LNCipedia gene ID: lnc-PTPRR-3
Location (hg38): chr12:71139833-71157973
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 398 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT029430
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -139.5488 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTPRR-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTD-2021H9.3.1-3:3
4.0 lnc-CTD-2021H9.3.1-3:3
4.1 lnc-CTD-2021H9.3.1-3:3
5.0 lnc-CTD-2021H9.3.1-3:3
5.1 lnc-LRRC10-18:3
5.2 lnc-PTPRR-3:3