Transcript: lnc-PTS-1:12

Basic information

LNCipedia transcript ID: lnc-PTS-1:12 
LNCipedia gene ID: lnc-PTS-1
Location (hg38): chr11:112290314-112293891
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 399 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT024208
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.5714 non-coding 
CPAT coding probability 0.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTS-1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTS-1:12
4.0 lnc-PTS-1:12
4.1 lnc-PTS-1:12
5.0 lnc-PTS-1:12
5.1 lnc-PTS-7:23
5.2 lnc-PTS-1:12