Transcript: lnc-PTS-1:15

Basic information

LNCipedia transcript ID: lnc-PTS-1:15 
LNCipedia gene ID: lnc-PTS-1
Location (hg38): chr11:112290330-112292422
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1356 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT024211
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -53.7064 non-coding 
CPAT coding probability 12.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTS-1:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTS-1:15
4.0 lnc-PTS-1:15
4.1 lnc-PTS-1:15
5.0 lnc-PTS-1:15
5.1 lnc-PTS-7:26
5.2 lnc-PTS-1:15