Transcript: lnc-PTS-1:27

Basic information

LNCipedia transcript ID: lnc-PTS-1:27 
LNCipedia gene ID: lnc-PTS-1
Location (hg38): chr11:112290310-112381233
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 12464 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000250303.2|MICT00000067340.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.8772 non-coding 
CPAT coding probability 8.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTS-1:27 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PTS-1:27
5.0 lnc-PTS-1:27
5.1 lnc-PTS-7:21
5.2 lnc-PTS-1:27