Transcript: lnc-PTS-1:6

Basic information

LNCipedia transcript ID: lnc-PTS-1:6 
LNCipedia gene ID: lnc-PTS-1
Location (hg38): chr11:112269217-112272929
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3713 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT024200
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.7551 non-coding 
CPAT coding probability 32.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTS-1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTS-1:6
4.0 lnc-PTS-1:6
4.1 lnc-PTS-1:6
5.0 lnc-PTS-1:6
5.1 lnc-PTS-7:1
5.2 lnc-PTS-1:6