Transcript: lnc-PTTG1IP-7:1

Basic information

LNCipedia transcript ID: lnc-PTTG1IP-7:1 
LNCipedia gene ID: lnc-PTTG1IP-7
Ensembl Gene ID: ENSG00000273027
Ensembl Transcript ID: ENST00000609461
Location (hg38): chr21:44929653-44930112
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 460 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609461.1
Alternative gene names: ENSG00000273027.1; LL21NC02-1C16.1; AL844908.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -48.5419 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PTTG1IP-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C21orf67-7:1
4.0 lnc-C21orf67-7:1
4.1 lnc-C21orf67-7:1
5.0 lnc-C21orf67-7:1
5.1 lnc-POFUT2-13:1
5.2 lnc-PTTG1IP-7:1