Transcript: lnc-PURG-1:2

Basic information

LNCipedia transcript ID: lnc-PURG-1:2 
LNCipedia gene ID: lnc-PURG-1
Ensembl Gene ID: ENSG00000253961
Ensembl Transcript ID: ENST00000521252
Location (hg38): chr8:31167078-31176872
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 296 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000521252.1; RP11-363L24.3-002; OTTHUMT00000376382.1; NONHSAT125904
Alternative gene names: ENSG00000253961.1; RP11-363L24.3; OTTHUMG00000163915.1; AC009563.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -193.9237 non-coding 
CPAT coding probability 2.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PURG-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PURG-1:2
4.0 lnc-PURG-1:2
4.1 lnc-PURG-1:2
5.0 lnc-PURG-1:2
5.1 lnc-PURG-5:2
5.2 lnc-PURG-1:2