Transcript: lnc-PWP2-1:6

Basic information

LNCipedia transcript ID: lnc-PWP2-1:6 
LNCipedia gene ID: lnc-PWP2-1
Location (hg38): chr21:44175455-44189556
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 14102 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000237604.1|HBMT00000922504.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.9645 non-coding 
CPAT coding probability 99.99% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PWP2-1:6 no no no no

Available literature

  1. Gu (2015), Aberrant expression of long noncoding RNAs in chronic thromboembolic pulmonary hypertension., Mol Med Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C21orf33-1:5
5.0 lnc-C21orf33-1:5
5.1 lnc-RRP1-13:5
5.2 lnc-PWP2-1:6