Transcript: lnc-PXDC1-12:8

Basic information

LNCipedia transcript ID: lnc-PXDC1-12:8 
LNCipedia gene ID: lnc-PXDC1-12
Location (hg38): chr6:3850787-3851068
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 282 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT107219
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -366.7787 non-coding 
CPAT coding probability 3.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PXDC1-12:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PXDC1-12:8
4.0 lnc-PXDC1-12:8
4.1 lnc-PXDC1-12:8
5.0 lnc-PXDC1-12:8
5.1 lnc-ECI2-20:7
5.2 lnc-PXDC1-12:8