Transcript: lnc-PXDC1-15:10

Basic information

LNCipedia transcript ID: lnc-PXDC1-15:10 
LNCipedia gene ID: lnc-PXDC1-15
Location (hg38): chr6:3904910-3912002
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7093 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260604.1|ENST00000566733.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.1968 non-coding 
CPAT coding probability 3.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PXDC1-15:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PXDC1-15:10
5.0 lnc-PXDC1-15:10
5.1 lnc-ECI2-18:6
5.2 lnc-PXDC1-15:10