Transcript: lnc-PXDC1-15:4

Basic information

LNCipedia transcript ID: lnc-PXDC1-15:4 
LNCipedia gene ID: lnc-PXDC1-15
Location (hg38): chr6:3887058-3887324
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 267 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT107235
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -401.499 non-coding 
CPAT coding probability 1.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PXDC1-15:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PXDC1-15:4
4.0 lnc-PXDC1-15:4
4.1 lnc-PXDC1-15:4
5.0 lnc-PXDC1-15:4
5.1 lnc-ECI2-18:14
5.2 lnc-PXDC1-15:4