Transcript: lnc-PXDN-1:2

Basic information

LNCipedia transcript ID: lnc-PXDN-1:2 
LNCipedia gene ID: lnc-PXDN-1
Location (hg38): chr2:1620510-1625410
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1632 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000203635.2|ENST00000366424.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 37.3116 non-coding 
CPAT coding probability 7.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PXDN-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PXDN-1:2
5.0 lnc-PXDN-1:2
5.1 lnc-RAD51AP2-206:2
5.2 lnc-PXDN-1:2