Transcript: lnc-QRSL1-2:4

Basic information

LNCipedia transcript ID: lnc-QRSL1-2:4 
LNCipedia gene ID: lnc-QRSL1-2
Location (hg38): chr6:106702892-106716504
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 773 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000085243.1|ENCT00000375964.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -139.7293 non-coding 
CPAT coding probability 9.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-QRSL1-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-QRSL1-2:4
5.0 lnc-QRSL1-2:4
5.1 lnc-SMPD2-49:2
5.2 lnc-QRSL1-2:4