Transcript: lnc-R3HCC1L-7:7

Basic information

LNCipedia transcript ID: lnc-R3HCC1L-7:7 
LNCipedia gene ID: lnc-R3HCC1L-7
Location (hg38): chr10:98446338-98454284
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1397 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000116155.1|ENCT00000049265.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -94.3295 non-coding 
CPAT coding probability 1.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-R3HCC1L-7:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C10orf28-7:6
5.0 lnc-C10orf28-7:6
5.1 lnc-SMC3-169:7
5.2 lnc-R3HCC1L-7:7