Transcript: lnc-R3HCC1L-7:8

Basic information

LNCipedia transcript ID: lnc-R3HCC1L-7:8 
LNCipedia gene ID: lnc-R3HCC1L-7
Location (hg38): chr10:98446338-98455619
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2910 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000116155.1|HBMT00000151840.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.8756 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-R3HCC1L-7:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C10orf28-7:7
5.0 lnc-C10orf28-7:7
5.1 lnc-SMC3-169:8
5.2 lnc-R3HCC1L-7:8