Transcript: lnc-RAB1A-11:4

Basic information

LNCipedia transcript ID: lnc-RAB1A-11:4 
LNCipedia gene ID: lnc-RAB1A-11
Location (hg38): chr2:65166407-65227598
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 250 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000048786.1|ENCT00000243179.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -138.8092 non-coding 
CPAT coding probability 3.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAB1A-11:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RAB1A-11:4
5.0 lnc-RAB1A-11:4
5.1 lnc-GKN2-78:3
5.2 lnc-RAB1A-11:4