Transcript: lnc-RAB1A-11:7

Basic information

LNCipedia transcript ID: lnc-RAB1A-11:7 
LNCipedia gene ID: lnc-RAB1A-11
Location (hg38): chr2:65222112-65227598
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 547 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000048786.1|MICT00000190692.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -32.4772 non-coding 
CPAT coding probability 0.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAB1A-11:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RAB1A-11:7
5.0 lnc-RAB1A-11:7
5.1 lnc-GKN2-78:7
5.2 lnc-RAB1A-11:7