Transcript: lnc-RAB1A-12:1

Basic information

LNCipedia transcript ID: lnc-RAB1A-12:1 
LNCipedia gene ID: lnc-RAB1A-12
Location (hg38): chr2:64699634-64717130
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1977 bp
Exons: 5
Sources: NONCODE v4; Nielsen et al.,2014
Alternative transcript names: NONHSAT071128; ucscGeneNc_uc002sdf_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.1716 non-coding 
CPAT coding probability 19.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAB1A-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RAB1A-12:1
4.0 lnc-RAB1A-12:1
4.1 lnc-RAB1A-12:1
5.0 lnc-RAB1A-12:1
5.1 lnc-GKN2-100:1
5.2 lnc-RAB1A-12:1