Transcript: lnc-RAB1A-1:3

Basic information

LNCipedia transcript ID: lnc-RAB1A-1:3 
LNCipedia gene ID: lnc-RAB1A-1
Location (hg38): chr2:65051321-65056134
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 237 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004288; NONHSAT071155
Alternative gene names: XLOC_002133; linc-SERTAD2-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 4.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAB1A-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RAB1A-1:3
3.1 lnc-RAB1A-1:3
4.0 lnc-RAB1A-1:3
4.1 lnc-RAB1A-1:3
5.0 lnc-RAB1A-1:3
5.1 lnc-GKN2-82:4
5.2 lnc-RAB1A-1:3