Transcript: lnc-RAB23-1:2

Basic information

LNCipedia transcript ID: lnc-RAB23-1:2 
LNCipedia gene ID: lnc-RAB23-1
Location (hg38): chr6:57260534-57262678
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1417 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; NONCODE v4
Alternative transcript names: ENST00000513979; TCONS_00011511; NONHSAT113289
Alternative gene names: ENSG00000250335; XLOC_005751; linc-RAB23-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -76.6807 non-coding 
CPAT coding probability 6.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAB23-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RAB23-1:2
3.1 lnc-RAB23-1:2
4.0 lnc-RAB23-1:2
4.1 lnc-RAB23-1:2
5.0 lnc-RAB23-1:2
5.1 lnc-GSTA5-47:5
5.2 lnc-RAB23-1:2