Transcript: lnc-RAB23-53:19

Basic information

LNCipedia transcript ID: lnc-RAB23-53:19 
LNCipedia gene ID: lnc-RAB23-53
Ensembl Gene ID: ENSG00000283352
Ensembl Transcript ID: ENST00000636069
Location (hg38): chr6:57919912-57961382
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 602 bp
Exons: 6
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000636069.1
Alternative gene names: ENSG00000283352.1; GUSBP1; ; AL021368.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 90.7464 coding 
CPAT coding probability 59.40% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RAB23-53:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00680:25
5.0 LINC00680:25
5.1 lnc-GSTA5-53:19
5.2 lnc-RAB23-53:19