Transcript: lnc-RAB23-53:32

Basic information

LNCipedia transcript ID: lnc-RAB23-53:32 
LNCipedia gene ID: lnc-RAB23-53
Location (hg38): chr6:57908414-57913409
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4445 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012196; NONHSAT113306
Alternative gene names: XLOC_005753; linc-RAB23-4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.2221 non-coding 
CPAT coding probability 2.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAB23-53:32 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RAB23-3:1
3.1 lnc-RAB23-3:1
4.0 LINC00680:16
4.1 LINC00680:16
5.0 LINC00680:16
5.1 lnc-GSTA5-53:32
5.2 lnc-RAB23-53:32