Transcript: lnc-RAB27B-11:5

Basic information

LNCipedia transcript ID: lnc-RAB27B-11:5 
LNCipedia gene ID: lnc-RAB27B-11
Location (hg38): chr18:55786581-55795128
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 611 bp
Exons: 5
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT059381; FPKM1_group_14048_transcript_4
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.1762 non-coding 
CPAT coding probability 0.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAB27B-11:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WDR7-9:7
4.0 lnc-RAB27B-11:5
4.1 lnc-RAB27B-11:5
5.0 lnc-RAB27B-11:5
5.1 lnc-WDR7-16:5
5.2 lnc-RAB27B-11:5