Transcript: lnc-RAB3A-3:1

Basic information

LNCipedia transcript ID: lnc-RAB3A-3:1 
LNCipedia gene ID: lnc-RAB3A-3
Ensembl Gene ID: ENSG00000269145
Ensembl Transcript ID: ENST00000600364
Location (hg38): chr19:18144522-18151691
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 463 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000600364.2
Alternative gene names: ENSG00000269145.2; AC007192.6; AC007192.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -66.0981 non-coding 
CPAT coding probability 1.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RAB3A-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RAB3A-3:1
4.0 lnc-RAB3A-3:1
4.1 lnc-RAB3A-3:1
5.0 lnc-RAB3A-3:1
5.1 lnc-PALM3-120:1
5.2 lnc-RAB3A-3:1