Transcript: lnc-RABEP1-5:1

Basic information

LNCipedia transcript ID: lnc-RABEP1-5:1 
LNCipedia gene ID: lnc-RABEP1-5
Location (hg38): chr17:5234969-5248464
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 630 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261879.1|FTMT26700010380.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.5684 non-coding 
CPAT coding probability 5.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RABEP1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-USP6-2:24
5.0 lnc-USP6-2:24
5.1 lnc-ELP5-73:1
5.2 lnc-RABEP1-5:1