Transcript: lnc-RABGAP1-1:7

Basic information

LNCipedia transcript ID: lnc-RABGAP1-1:7 
LNCipedia gene ID: lnc-RABGAP1-1
Location (hg38): chr9:122931693-122940246
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4088 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1408:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.2115 non-coding 
CPAT coding probability 6.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RABGAP1-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RABGAP1-1:7
4.1 lnc-RABGAP1-1:7
5.0 lnc-RABGAP1-1:7
5.1 lnc-DAB2IP-24:2
5.2 lnc-RABGAP1-1:7