Transcript: lnc-RAD23B-5:7

Basic information

LNCipedia transcript ID: lnc-RAD23B-5:7 
LNCipedia gene ID: lnc-RAD23B-5
Location (hg38): chr9:107490025-107493637
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3613 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000106563.1|ENCT00000449325.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 48.7895 non-coding 
CPAT coding probability 10.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-RAD23B-5:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RAD23B-5:7
5.0 lnc-RAD23B-5:7
5.1 lnc-PRPF4-110:2
5.2 lnc-RAD23B-5:7